micca-midpoint-rootΒΆ

Performs a midpoint rooting on a phylogenetic tree.

$ micca-midpoint-root --help
usage: micca-midpoint-root [-h] [-v] [-t {newick,phyloxml,nexus}] input output

micca-midpoint-root performs a midpoint rooting on a phylogenetic tree.

positional arguments:
  input                 input tree file
  output                output tree file

optional arguments:
  -h, --help            show this help message and exit
  -v, --version         show program's version number and exit
  -t {newick,phyloxml,nexus}, --tree-format {newick,phyloxml,nexus}
                        tree format (default newick)

Example:

 $ micca-midpoint-root tree.tre rooted.tre

micca v. 0.1.
Author: Davide Albanese <davide.albanese@fmach.it>
Fondazione Edmund Mach, 2014.

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