micca-plot-rankΒΆ

Plots OTUs rank abundaces for each sample from an OTU table.

$ micca-plot-rank --help
usage: micca-plot-rank [-h] [-v] input output

micca-plot-rank plots OTUs rank abundaces for each sample from an OTU table.

positional arguments:
  input          input OTU table file
  output         output image file (.png, .pdf, .ps, .eps, .svg). The image
                 type is autodetected from the file extension

optional arguments:
  -h, --help     show this help message and exit
  -v, --version  show program's version number and exit

Example:

 $ micca-plot-rank otu_table.txt rank.png

micca v. 0.1.
Author: Davide Albanese <davide.albanese@fmach.it>
Fondazione Edmund Mach, 2014.

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